Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMPD1P17405 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.61■□□□□ 0.57
SMPD1P17405 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SMPD1P17405 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SMPD1P17405 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.6■□□□□ 0.57
SMPD1P17405 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SMPD1P17405 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 FAM220BP-201ENST00000377689 816 ntBASIC18.6■□□□□ 0.57
SMPD1P17405 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.6■□□□□ 0.57
SMPD1P17405 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.6■□□□□ 0.57
SMPD1P17405 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMPD1P17405 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 SPTLC1P1-201ENST00000447199 261 ntBASIC18.6■□□□□ 0.57
SMPD1P17405 AC009477.1-201ENST00000452936 217 ntBASIC18.6■□□□□ 0.57
SMPD1P17405 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SMPD1P17405 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.6■□□□□ 0.57
SMPD1P17405 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMPD1P17405 AC025048.6-201ENST00000634326 1161 ntBASIC18.6■□□□□ 0.57
SMPD1P17405 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 SNX33P1-201ENST00000592116 1762 ntBASIC18.6■□□□□ 0.57
SMPD1P17405 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.6■□□□□ 0.57
SMPD1P17405 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMPD1P17405 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.6■□□□□ 0.57
SMPD1P17405 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.59■□□□□ 0.57
SMPD1P17405 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.59■□□□□ 0.57
SMPD1P17405 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 AL035456.1-201ENST00000456064 1369 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 GK-202ENST00000378941 458 ntTSL 3 BASIC18.59■□□□□ 0.57
SMPD1P17405 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 AL353705.2-201ENST00000428243 662 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.59■□□□□ 0.57
SMPD1P17405 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 AC009407.1-201ENST00000568958 598 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.59■□□□□ 0.57
SMPD1P17405 TEX28P1-201ENST00000613479 1221 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 TEX28P2-201ENST00000617764 1221 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SMPD1P17405 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.59■□□□□ 0.57
SMPD1P17405 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 AC092068.3-201ENST00000587894 2016 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.59■□□□□ 0.57
SMPD1P17405 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.59■□□□□ 0.57
SMPD1P17405 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SMPD1P17405 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMPD1P17405 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.59■□□□□ 0.57
SMPD1P17405 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.58■□□□□ 0.57
SMPD1P17405 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.58■□□□□ 0.57
SMPD1P17405 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMPD1P17405 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMPD1P17405 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMPD1P17405 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SMPD1P17405 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SMPD1P17405 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SMPD1P17405 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 RPL37AP1-201ENST00000412502 279 ntBASIC18.58■□□□□ 0.56
SMPD1P17405 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.58■□□□□ 0.56
SMPD1P17405 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms