Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 AC129492.6-201ENST00000611383 1305 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 AL645728.1-201ENST00000366221 2101 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 MIR940-201ENST00000401276 94 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 HCG4B-203ENST00000450128 991 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 CXCL1P1-201ENST00000502804 216 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.92□□□□□ -0.18
CCL3L1P16619 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL3L1P16619 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 PRORSD1P-202ENST00000563365 2154 ntBASIC13.92□□□□□ -0.18
CCL3L1P16619 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CCL3L1P16619 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL3L1P16619 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL3L1P16619 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL3L1P16619 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 AC078925.2-201ENST00000624013 1973 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CCL3L1P16619 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CCL3L1P16619 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.91□□□□□ -0.18
CCL3L1P16619 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 PMS2P1-201ENST00000431037 1228 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 AP000347.1-202ENST00000435868 847 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL3L1P16619 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.91□□□□□ -0.18
CCL3L1P16619 AC018845.2-201ENST00000568326 409 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.91□□□□□ -0.18
CCL3L1P16619 AC140113.2-201ENST00000604370 208 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 ACTL9-202ENST00000612068 1252 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL3L1P16619 AC010507.1-201ENST00000633895 436 ntBASIC13.91□□□□□ -0.18
CCL3L1P16619 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CCL3L1P16619 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL3L1P16619 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms