Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 AL021920.2-201ENST00000624828 1351 ntBASIC19.81■□□□□ 0.76
TOP1P11387 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.81■□□□□ 0.76
TOP1P11387 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.8■□□□□ 0.76
TOP1P11387 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TOP1P11387 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TOP1P11387 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TOP1P11387 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.8■□□□□ 0.76
TOP1P11387 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.8■□□□□ 0.76
TOP1P11387 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 ALG1L5P-201ENST00000482043 771 ntBASIC19.8■□□□□ 0.76
TOP1P11387 AC005829.1-201ENST00000570002 483 ntBASIC19.8■□□□□ 0.76
TOP1P11387 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 AC068137.2-201ENST00000605408 478 ntBASIC19.8■□□□□ 0.76
TOP1P11387 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TOP1P11387 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TOP1P11387 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TOP1P11387 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TOP1P11387 AL353732.1-201ENST00000569618 1459 ntBASIC19.79■□□□□ 0.76
TOP1P11387 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TOP1P11387 KRT8P49-201ENST00000604166 1432 ntBASIC19.79■□□□□ 0.76
TOP1P11387 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.79■□□□□ 0.76
TOP1P11387 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.79■□□□□ 0.76
TOP1P11387 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 AL031432.2-201ENST00000566714 459 ntBASIC19.79■□□□□ 0.76
TOP1P11387 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.79■□□□□ 0.76
TOP1P11387 AL928711.1-201ENST00000570165 459 ntBASIC19.79■□□□□ 0.76
TOP1P11387 AC091167.2-201ENST00000579581 588 ntBASIC19.79■□□□□ 0.76
TOP1P11387 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TOP1P11387 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.79■□□□□ 0.76
TOP1P11387 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TOP1P11387 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TOP1P11387 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.79■□□□□ 0.76
TOP1P11387 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
TOP1P11387 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.78■□□□□ 0.76
TOP1P11387 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TOP1P11387 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 HTR5BP-201ENST00000430851 1154 ntBASIC19.78■□□□□ 0.76
TOP1P11387 MKNK2P1-201ENST00000437526 628 ntBASIC19.78■□□□□ 0.76
TOP1P11387 YBX1P5-201ENST00000509441 847 ntBASIC19.78■□□□□ 0.76
TOP1P11387 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.78■□□□□ 0.76
TOP1P11387 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
TOP1P11387 AL078644.1-201ENST00000609881 752 ntBASIC19.78■□□□□ 0.76
TOP1P11387 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms