Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.73■□□□□ 0.43
RARAP10276 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.73■□□□□ 0.43
RARAP10276 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 LINC00554-201ENST00000564841 3011 ntBASIC17.73■□□□□ 0.43
RARAP10276 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.73■□□□□ 0.43
RARAP10276 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.73■□□□□ 0.43
RARAP10276 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RARAP10276 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 ALOX12P2-203ENST00000570921 1945 ntBASIC17.72■□□□□ 0.43
RARAP10276 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.72■□□□□ 0.43
RARAP10276 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 EMBP1-201ENST00000458200 901 ntBASIC17.72■□□□□ 0.43
RARAP10276 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.72■□□□□ 0.43
RARAP10276 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARAP10276 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RARAP10276 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RARAP10276 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RARAP10276 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RARAP10276 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
RARAP10276 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.71■□□□□ 0.43
RARAP10276 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.71■□□□□ 0.43
RARAP10276 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RARAP10276 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.71■□□□□ 0.43
RARAP10276 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.71■□□□□ 0.43
RARAP10276 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.71■□□□□ 0.43
RARAP10276 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.71■□□□□ 0.43
RARAP10276 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.71■□□□□ 0.43
RARAP10276 AP002490.2-201ENST00000524791 560 ntBASIC17.71■□□□□ 0.43
RARAP10276 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
RARAP10276 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.71■□□□□ 0.43
RARAP10276 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
RARAP10276 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARAP10276 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.71■□□□□ 0.42
RARAP10276 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms