Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.46■□□□□ 0.55
CLTAP09496 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.46■□□□□ 0.55
CLTAP09496 AC004832.2-201ENST00000426397 482 ntBASIC18.46■□□□□ 0.55
CLTAP09496 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.46■□□□□ 0.55
CLTAP09496 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.46■□□□□ 0.55
CLTAP09496 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.46■□□□□ 0.55
CLTAP09496 DUX4L17-201ENST00000557360 1267 ntBASIC18.46■□□□□ 0.55
CLTAP09496 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.46■□□□□ 0.55
CLTAP09496 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.46■□□□□ 0.55
CLTAP09496 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.46■□□□□ 0.55
CLTAP09496 AC004877.2-201ENST00000623941 599 ntBASIC18.46■□□□□ 0.55
CLTAP09496 AC007064.4-201ENST00000637740 555 ntBASIC18.46■□□□□ 0.55
CLTAP09496 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLTAP09496 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.46■□□□□ 0.55
CLTAP09496 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLTAP09496 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLTAP09496 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.46■□□□□ 0.55
CLTAP09496 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLTAP09496 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.46■□□□□ 0.55
CLTAP09496 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.46■□□□□ 0.54
CLTAP09496 AC060834.1-201ENST00000443027 2032 ntBASIC18.45■□□□□ 0.54
CLTAP09496 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
CLTAP09496 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.45■□□□□ 0.54
CLTAP09496 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLTAP09496 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.45■□□□□ 0.54
CLTAP09496 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.45■□□□□ 0.54
CLTAP09496 BX842568.4-201ENST00000421222 227 ntBASIC18.45■□□□□ 0.54
CLTAP09496 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.45■□□□□ 0.54
CLTAP09496 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.45■□□□□ 0.54
CLTAP09496 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CLTAP09496 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.45■□□□□ 0.54
CLTAP09496 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.45■□□□□ 0.54
CLTAP09496 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.45■□□□□ 0.54
CLTAP09496 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.45■□□□□ 0.54
CLTAP09496 AC023141.13-201ENST00000604991 943 ntBASIC18.45■□□□□ 0.54
CLTAP09496 AC092865.6-201ENST00000642101 219 ntBASIC18.45■□□□□ 0.54
CLTAP09496 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.45■□□□□ 0.54
CLTAP09496 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.45■□□□□ 0.54
CLTAP09496 BCAR1-209ENST00000546196 1340 ntBASIC18.45■□□□□ 0.54
CLTAP09496 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.45■□□□□ 0.54
CLTAP09496 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.45■□□□□ 0.54
CLTAP09496 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLTAP09496 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLTAP09496 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.44■□□□□ 0.54
CLTAP09496 AL021920.2-201ENST00000624828 1351 ntBASIC18.44■□□□□ 0.54
CLTAP09496 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.44■□□□□ 0.54
CLTAP09496 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLTAP09496 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CLTAP09496 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.44■□□□□ 0.54
CLTAP09496 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.44■□□□□ 0.54
CLTAP09496 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.44■□□□□ 0.54
CLTAP09496 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.44■□□□□ 0.54
CLTAP09496 AL513190.1-201ENST00000621254 727 ntBASIC18.44■□□□□ 0.54
CLTAP09496 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.44■□□□□ 0.54
CLTAP09496 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.44■□□□□ 0.54
CLTAP09496 FER1L4-210ENST00000615531 5998 ntBASIC18.44■□□□□ 0.54
CLTAP09496 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLTAP09496 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms