Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RARRES2P8-201ENST00000566335 367 ntBASIC17.01■□□□□ 0.31
RETP07949 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.01■□□□□ 0.31
RETP07949 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RETP07949 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.01■□□□□ 0.31
RETP07949 AL662799.1-202ENST00000614205 422 ntBASIC17.01■□□□□ 0.31
RETP07949 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.01■□□□□ 0.31
RETP07949 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 AC008677.1-201ENST00000519230 1561 ntBASIC17.01■□□□□ 0.31
RETP07949 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RETP07949 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RETP07949 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 MYCLP1-201ENST00000372451 1075 ntBASIC17■□□□□ 0.31
RETP07949 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17■□□□□ 0.31
RETP07949 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17■□□□□ 0.31
RETP07949 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17■□□□□ 0.31
RETP07949 AC022494.1-201ENST00000466044 728 ntBASIC17■□□□□ 0.31
RETP07949 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
RETP07949 IGHV3-62-201ENST00000520057 340 ntBASIC17■□□□□ 0.31
RETP07949 AC069120.2-201ENST00000524091 540 ntBASIC17■□□□□ 0.31
RETP07949 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17■□□□□ 0.31
RETP07949 AC026150.2-201ENST00000564693 1156 ntBASIC17■□□□□ 0.31
RETP07949 AP001094.4-201ENST00000579008 2176 ntBASIC17■□□□□ 0.31
RETP07949 SPDYE22P-201ENST00000582158 798 ntBASIC17■□□□□ 0.31
RETP07949 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17■□□□□ 0.31
RETP07949 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17■□□□□ 0.31
RETP07949 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RETP07949 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RETP07949 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RETP07949 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17■□□□□ 0.31
RETP07949 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
RETP07949 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RETP07949 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RETP07949 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.99■□□□□ 0.31
RETP07949 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.99■□□□□ 0.31
RETP07949 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RETP07949 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 AL138688.1-201ENST00000624851 1594 ntBASIC16.99■□□□□ 0.31
RETP07949 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RETP07949 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.99■□□□□ 0.31
RETP07949 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.99■□□□□ 0.31
RETP07949 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.99■□□□□ 0.31
RETP07949 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 AC097493.3-201ENST00000509725 367 ntBASIC16.99■□□□□ 0.31
RETP07949 KRT8P23-201ENST00000560090 1207 ntBASIC16.99■□□□□ 0.31
RETP07949 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.99■□□□□ 0.31
RETP07949 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.99■□□□□ 0.31
RETP07949 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.99■□□□□ 0.31
RETP07949 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.99■□□□□ 0.31
RETP07949 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.99■□□□□ 0.31
RETP07949 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RETP07949 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
RETP07949 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.99■□□□□ 0.31
RETP07949 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.99■□□□□ 0.31
RETP07949 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RETP07949 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RETP07949 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RETP07949 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RETP07949 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.98■□□□□ 0.31
RETP07949 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.98■□□□□ 0.31
RETP07949 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms