Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PDGFAP04085 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFAP04085 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PDGFAP04085 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PDGFAP04085 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PDGFAP04085 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
PDGFAP04085 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.81■□□□□ 0.12
PDGFAP04085 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.81■□□□□ 0.12
PDGFAP04085 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.81■□□□□ 0.12
PDGFAP04085 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.81■□□□□ 0.12
PDGFAP04085 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 TIMM8BP1-201ENST00000452384 211 ntBASIC15.81■□□□□ 0.12
PDGFAP04085 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.81■□□□□ 0.12
PDGFAP04085 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.81■□□□□ 0.12
PDGFAP04085 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PDGFAP04085 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
PDGFAP04085 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.81■□□□□ 0.12
PDGFAP04085 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.81■□□□□ 0.12
PDGFAP04085 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.81■□□□□ 0.12
PDGFAP04085 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PDGFAP04085 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.81■□□□□ 0.12
PDGFAP04085 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFAP04085 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.8■□□□□ 0.12
PDGFAP04085 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PDGFAP04085 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PDGFAP04085 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.8■□□□□ 0.12
PDGFAP04085 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PDGFAP04085 ACTG1P4-201ENST00000425123 1122 ntBASIC15.8■□□□□ 0.12
PDGFAP04085 FAM86GP-201ENST00000448322 971 ntBASIC15.8■□□□□ 0.12
PDGFAP04085 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PDGFAP04085 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 DUX4L27-201ENST00000554796 1261 ntBASIC15.8■□□□□ 0.12
PDGFAP04085 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.8■□□□□ 0.12
PDGFAP04085 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.8■□□□□ 0.12
PDGFAP04085 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PDGFAP04085 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms