Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 AC148477.5-201ENST00000625164 1645 ntBASIC15.21■□□□□ 0.03
HLA-DQA2P01906 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 AC092119.3-201ENST00000612618 583 ntBASIC15.21■□□□□ 0.03
HLA-DQA2P01906 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.21■□□□□ 0.03
HLA-DQA2P01906 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA2P01906 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
HLA-DQA2P01906 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 AC091076.1-201ENST00000610741 619 ntBASIC15.2■□□□□ 0.02
HLA-DQA2P01906 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 AC093458.2-201ENST00000623150 629 ntBASIC15.2■□□□□ 0.02
HLA-DQA2P01906 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA2P01906 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms