Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AC020916.1-201ENST00000587762 1774 ntBASIC13.04□□□□□ -0.32
TRBV12-3P01733 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 FLJ38576-201ENST00000623820 2459 ntBASIC13.04□□□□□ -0.32
TRBV12-3P01733 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 MIR574-201ENST00000385209 96 ntBASIC13.04□□□□□ -0.32
TRBV12-3P01733 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 CXCL1P1-201ENST00000502804 216 ntBASIC13.04□□□□□ -0.32
TRBV12-3P01733 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AC027601.4-201ENST00000611259 610 ntBASIC13.04□□□□□ -0.32
TRBV12-3P01733 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 AC092171.3-201ENST00000610122 2651 ntBASIC13.04□□□□□ -0.32
TRBV12-3P01733 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV12-3P01733 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV12-3P01733 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 UBALD1-205ENST00000590891 2641 ntBASIC13.03□□□□□ -0.32
TRBV12-3P01733 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.03□□□□□ -0.32
TRBV12-3P01733 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 FAM185BP-201ENST00000443595 716 ntBASIC13.03□□□□□ -0.32
TRBV12-3P01733 KRT18P3-201ENST00000451602 1288 ntBASIC13.03□□□□□ -0.32
TRBV12-3P01733 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 AGGF1P2-201ENST00000426656 2106 ntBASIC13.03□□□□□ -0.32
TRBV12-3P01733 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV12-3P01733 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV12-3P01733 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms