Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFBP01127 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFBP01127 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDGFBP01127 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PDGFBP01127 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFBP01127 BOLA2P3-201ENST00000404566 256 ntBASIC16.76■□□□□ 0.27
PDGFBP01127 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFBP01127 GOLGA2P4-201ENST00000441462 777 ntBASIC16.76■□□□□ 0.27
PDGFBP01127 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 CTBP2P5-201ENST00000454986 1264 ntBASIC16.76■□□□□ 0.27
PDGFBP01127 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFBP01127 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFBP01127 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFBP01127 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFBP01127 AC093726.1-201ENST00000608064 963 ntBASIC16.76■□□□□ 0.27
PDGFBP01127 AL033527.5-201ENST00000641382 801 ntBASIC16.76■□□□□ 0.27
PDGFBP01127 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFBP01127 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDGFBP01127 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFBP01127 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFBP01127 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PDGFBP01127 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFBP01127 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PDGFBP01127 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PDGFBP01127 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.75■□□□□ 0.27
PDGFBP01127 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFBP01127 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.75■□□□□ 0.27
PDGFBP01127 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.75■□□□□ 0.27
PDGFBP01127 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.75■□□□□ 0.27
PDGFBP01127 AC103810.3-201ENST00000583567 96 ntBASIC16.75■□□□□ 0.27
PDGFBP01127 BTNL10-201ENST00000595971 695 ntBASIC16.75■□□□□ 0.27
PDGFBP01127 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PDGFBP01127 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.75■□□□□ 0.27
PDGFBP01127 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDGFBP01127 FLJ13224-201ENST00000313737 1514 ntBASIC16.75■□□□□ 0.27
PDGFBP01127 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFBP01127 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDGFBP01127 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 ELK2AP-201ENST00000392510 1007 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 AC092506.1-202ENST00000401022 528 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 MEP1AP4-201ENST00000423244 1087 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFBP01127 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC108725.1-201ENST00000495472 409 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC098859.1-201ENST00000502915 1238 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 USP32P1-208ENST00000506594 1164 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PDGFBP01127 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.74■□□□□ 0.27
PDGFBP01127 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC010319.3-201ENST00000597028 470 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 RPSAP52-203ENST00000622976 1023 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFBP01127 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PDGFBP01127 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFBP01127 PDIA3P1-201ENST00000471856 1510 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 AC018665.1-201ENST00000622927 1362 ntBASIC16.74■□□□□ 0.27
PDGFBP01127 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms