Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC105339.1-204ENST00000636249 355 ntBASIC20.06■□□□□ 0.8
MBD4O95243 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD4O95243 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
MBD4O95243 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.06■□□□□ 0.8
MBD4O95243 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
MBD4O95243 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 AC254562.1-201ENST00000417586 456 ntBASIC20.05■□□□□ 0.8
MBD4O95243 CNN2P11-201ENST00000429351 262 ntBASIC20.05■□□□□ 0.8
MBD4O95243 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 TIMM8BP1-201ENST00000452384 211 ntBASIC20.05■□□□□ 0.8
MBD4O95243 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 KRT8P48-201ENST00000515599 1220 ntBASIC20.05■□□□□ 0.8
MBD4O95243 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.05■□□□□ 0.8
MBD4O95243 SNHG9-202ENST00000564014 471 ntBASIC20.05■□□□□ 0.8
MBD4O95243 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.05■□□□□ 0.8
MBD4O95243 MIR3909-201ENST00000579518 119 ntBASIC20.05■□□□□ 0.8
MBD4O95243 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.05■□□□□ 0.8
MBD4O95243 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 AL513210.1-201ENST00000629608 234 ntBASIC20.05■□□□□ 0.8
MBD4O95243 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 AC079781.4-201ENST00000641908 219 ntBASIC20.05■□□□□ 0.8
MBD4O95243 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
MBD4O95243 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MBD4O95243 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD4O95243 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MBD4O95243 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MBD4O95243 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 PMS2P4-201ENST00000412466 1052 ntBASIC20.04■□□□□ 0.8
MBD4O95243 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.04■□□□□ 0.8
MBD4O95243 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.04■□□□□ 0.8
MBD4O95243 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.04■□□□□ 0.8
MBD4O95243 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MBD4O95243 RARRES2P8-201ENST00000566335 367 ntBASIC20.04■□□□□ 0.8
MBD4O95243 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 AC022145.2-201ENST00000598203 171 ntBASIC20.04■□□□□ 0.8
MBD4O95243 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.04■□□□□ 0.8
MBD4O95243 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD4O95243 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD4O95243 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MBD4O95243 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MBD4O95243 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms