Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH4O75427 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH4O75427 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH4O75427 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LRCH4O75427 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 AL512652.2-201ENST00000625156 1716 ntBASIC17.53■□□□□ 0.4
LRCH4O75427 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH4O75427 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH4O75427 AC006449.5-201ENST00000610658 2098 ntBASIC17.53■□□□□ 0.4
LRCH4O75427 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH4O75427 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.53■□□□□ 0.4
LRCH4O75427 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH4O75427 MRPL20P1-201ENST00000400819 433 ntBASIC17.53■□□□□ 0.4
LRCH4O75427 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LRCH4O75427 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH4O75427 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LRCH4O75427 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
LRCH4O75427 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRCH4O75427 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.53■□□□□ 0.4
LRCH4O75427 AC004790.2-201ENST00000623588 572 ntBASIC17.53■□□□□ 0.4
LRCH4O75427 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRCH4O75427 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH4O75427 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH4O75427 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH4O75427 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
LRCH4O75427 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH4O75427 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.52■□□□□ 0.4
LRCH4O75427 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH4O75427 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LRCH4O75427 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH4O75427 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRCH4O75427 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH4O75427 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.52■□□□□ 0.4
LRCH4O75427 AC098831.1-202ENST00000438821 336 ntBASIC17.52■□□□□ 0.4
LRCH4O75427 AC009078.2-202ENST00000463353 338 ntBASIC17.52■□□□□ 0.4
LRCH4O75427 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.52■□□□□ 0.4
LRCH4O75427 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH4O75427 AC005412.3-201ENST00000580309 715 ntBASIC17.52■□□□□ 0.4
LRCH4O75427 CYP2A7P1-201ENST00000595391 815 ntBASIC17.52■□□□□ 0.4
LRCH4O75427 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.52■□□□□ 0.4
LRCH4O75427 AC116407.3-201ENST00000623905 1129 ntBASIC17.52■□□□□ 0.4
LRCH4O75427 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRCH4O75427 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH4O75427 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRCH4O75427 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRCH4O75427 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
LRCH4O75427 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRCH4O75427 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRCH4O75427 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 PCDH8P1-201ENST00000428983 2773 ntBASIC17.51■□□□□ 0.39
LRCH4O75427 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.51■□□□□ 0.39
LRCH4O75427 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.51■□□□□ 0.39
LRCH4O75427 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRCH4O75427 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
LRCH4O75427 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 KRT8P39-201ENST00000396270 1433 ntBASIC17.51■□□□□ 0.39
LRCH4O75427 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRCH4O75427 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
LRCH4O75427 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.51■□□□□ 0.39
LRCH4O75427 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms