Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CDH16O75309 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH16O75309 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH16O75309 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDH16O75309 AL139011.1-202ENST00000642063 584 ntBASIC17.1■□□□□ 0.33
CDH16O75309 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 AL596087.1-201ENST00000400979 1969 ntBASIC17.09■□□□□ 0.33
CDH16O75309 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 AC104640.1-201ENST00000562617 2109 ntBASIC17.09■□□□□ 0.33
CDH16O75309 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH16O75309 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH16O75309 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 KRT18P38-201ENST00000449496 1282 ntBASIC17.09■□□□□ 0.33
CDH16O75309 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH16O75309 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 AL592071.1-201ENST00000611956 408 ntBASIC17.09■□□□□ 0.33
CDH16O75309 HYMAI.1-201ENST00000620949 238 ntBASIC17.09■□□□□ 0.33
CDH16O75309 AD001527.2-201ENST00000622994 785 ntBASIC17.09■□□□□ 0.33
CDH16O75309 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH16O75309 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDH16O75309 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 MST1L-201ENST00000442552 2185 ntBASIC17.09■□□□□ 0.33
CDH16O75309 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH16O75309 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH16O75309 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH16O75309 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CDH16O75309 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.08■□□□□ 0.33
CDH16O75309 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH16O75309 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH16O75309 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH16O75309 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH16O75309 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH16O75309 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH16O75309 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH16O75309 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH16O75309 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 TSPY5P-201ENST00000426936 936 ntBASIC17.08■□□□□ 0.32
CDH16O75309 AC117947.1-201ENST00000427448 529 ntBASIC17.08■□□□□ 0.32
CDH16O75309 AC112907.2-201ENST00000448639 330 ntBASIC17.08■□□□□ 0.32
CDH16O75309 DUX4L26-201ENST00000489078 1255 ntBASIC17.08■□□□□ 0.32
CDH16O75309 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH16O75309 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CDH16O75309 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH16O75309 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH16O75309 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH16O75309 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms