Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC078925.2-201ENST00000624013 1973 ntBASIC15.87■□□□□ 0.13
LDB3O75112 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 PMS2P1-201ENST00000431037 1228 ntBASIC15.87■□□□□ 0.13
LDB3O75112 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.87■□□□□ 0.13
LDB3O75112 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.87■□□□□ 0.13
LDB3O75112 AC018845.2-201ENST00000568326 409 ntBASIC15.87■□□□□ 0.13
LDB3O75112 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 AC027601.4-201ENST00000611259 610 ntBASIC15.87■□□□□ 0.13
LDB3O75112 ACTL9-202ENST00000612068 1252 ntBASIC15.87■□□□□ 0.13
LDB3O75112 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 AC010507.1-201ENST00000633895 436 ntBASIC15.87■□□□□ 0.13
LDB3O75112 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LDB3O75112 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LDB3O75112 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.87■□□□□ 0.13
LDB3O75112 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB3O75112 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 SLC22A20-204ENST00000530038 1673 ntBASIC15.86■□□□□ 0.13
LDB3O75112 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
LDB3O75112 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 MIR574-201ENST00000385209 96 ntBASIC15.86■□□□□ 0.13
LDB3O75112 FAM185BP-201ENST00000443595 716 ntBASIC15.86■□□□□ 0.13
LDB3O75112 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.86■□□□□ 0.13
LDB3O75112 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.86■□□□□ 0.13
LDB3O75112 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.86■□□□□ 0.13
LDB3O75112 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.86■□□□□ 0.13
LDB3O75112 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 AC079328.2-201ENST00000561241 3354 ntBASIC15.86■□□□□ 0.13
LDB3O75112 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB3O75112 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
LDB3O75112 AL391256.1-201ENST00000443260 1855 ntBASIC15.86■□□□□ 0.13
LDB3O75112 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 FLJ38576-201ENST00000623820 2459 ntBASIC15.86■□□□□ 0.13
LDB3O75112 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB3O75112 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB3O75112 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LDB3O75112 AC131009.4-201ENST00000624048 1740 ntBASIC15.85■□□□□ 0.13
LDB3O75112 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LDB3O75112 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB3O75112 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB3O75112 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB3O75112 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB3O75112 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms