Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.82■□□□□ 0.28
KLHL41O60662 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.82■□□□□ 0.28
KLHL41O60662 AC117500.6-201ENST00000624871 588 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 AL513477.1-201ENST00000602865 2407 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
KLHL41O60662 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 AL356309.3-201ENST00000624132 1934 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KLHL41O60662 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.82■□□□□ 0.28
KLHL41O60662 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
KLHL41O60662 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 AL596257.1-201ENST00000641463 2694 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 CYP2T1P-202ENST00000641596 2535 ntBASIC16.81■□□□□ 0.28
KLHL41O60662 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL41O60662 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.81■□□□□ 0.28
KLHL41O60662 AC068472.1-201ENST00000474589 881 ntBASIC16.81■□□□□ 0.28
KLHL41O60662 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.81■□□□□ 0.28
KLHL41O60662 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL41O60662 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL41O60662 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
KLHL41O60662 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL41O60662 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLHL41O60662 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL41O60662 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KLHL41O60662 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHL41O60662 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
KLHL41O60662 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
KLHL41O60662 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KLHL41O60662 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.8■□□□□ 0.28
KLHL41O60662 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 SLC25A6P4-201ENST00000586535 553 ntBASIC16.8■□□□□ 0.28
KLHL41O60662 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms