Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 FAM185BP-201ENST00000443595 716 ntBASIC16.85■□□□□ 0.29
LDB2O43679 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.85■□□□□ 0.29
LDB2O43679 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB2O43679 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
LDB2O43679 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
LDB2O43679 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
LDB2O43679 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB2O43679 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB2O43679 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB2O43679 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB2O43679 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LDB2O43679 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 AL022342.1-201ENST00000400363 863 ntBASIC16.84■□□□□ 0.29
LDB2O43679 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB2O43679 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB2O43679 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB2O43679 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB2O43679 CYP2A7P1-201ENST00000595391 815 ntBASIC16.84■□□□□ 0.29
LDB2O43679 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.84■□□□□ 0.29
LDB2O43679 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB2O43679 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LDB2O43679 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB2O43679 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB2O43679 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB2O43679 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
LDB2O43679 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.83■□□□□ 0.29
LDB2O43679 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LDB2O43679 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LDB2O43679 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.83■□□□□ 0.28
LDB2O43679 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 IGLL3P-201ENST00000412472 434 ntBASIC16.83■□□□□ 0.28
LDB2O43679 VN2R19P-201ENST00000442399 1052 ntBASIC16.83■□□□□ 0.28
LDB2O43679 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LDB2O43679 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.83■□□□□ 0.28
LDB2O43679 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LDB2O43679 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.83■□□□□ 0.28
LDB2O43679 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.83■□□□□ 0.28
LDB2O43679 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LDB2O43679 MIR4751-201ENST00000578027 74 ntBASIC16.83■□□□□ 0.28
LDB2O43679 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
LDB2O43679 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
LDB2O43679 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms