Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.89■□□□□ 0.93
SRGAP3O43295 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.89■□□□□ 0.93
SRGAP3O43295 AC140658.5-201ENST00000438532 169 ntBASIC20.89■□□□□ 0.93
SRGAP3O43295 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.89■□□□□ 0.93
SRGAP3O43295 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.89■□□□□ 0.93
SRGAP3O43295 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.89■□□□□ 0.93
SRGAP3O43295 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.89■□□□□ 0.93
SRGAP3O43295 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SRGAP3O43295 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.89■□□□□ 0.93
SRGAP3O43295 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SRGAP3O43295 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SRGAP3O43295 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.88■□□□□ 0.93
SRGAP3O43295 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.88■□□□□ 0.93
SRGAP3O43295 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SRGAP3O43295 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.88■□□□□ 0.93
SRGAP3O43295 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SRGAP3O43295 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.88■□□□□ 0.93
SRGAP3O43295 GPX1P2-201ENST00000429271 606 ntBASIC20.88■□□□□ 0.93
SRGAP3O43295 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.88■□□□□ 0.93
SRGAP3O43295 DNAJB3-201ENST00000446806 729 ntBASIC20.88■□□□□ 0.93
SRGAP3O43295 ALG1L5P-201ENST00000482043 771 ntBASIC20.88■□□□□ 0.93
SRGAP3O43295 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.88■□□□□ 0.93
SRGAP3O43295 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SRGAP3O43295 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.88■□□□□ 0.93
SRGAP3O43295 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.88■□□□□ 0.93
SRGAP3O43295 AL078644.1-201ENST00000609881 752 ntBASIC20.88■□□□□ 0.93
SRGAP3O43295 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.88■□□□□ 0.93
SRGAP3O43295 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SRGAP3O43295 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SRGAP3O43295 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.88■□□□□ 0.93
SRGAP3O43295 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SRGAP3O43295 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRGAP3O43295 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SRGAP3O43295 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SRGAP3O43295 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 RNU1-129P-201ENST00000384064 167 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 KRT18P13-201ENST00000400056 1290 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 RPSAP43-201ENST00000402237 625 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 AC112482.1-201ENST00000492080 688 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.87■□□□□ 0.93
SRGAP3O43295 U1.21-201ENST00000580816 167 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 AC091812.2-201ENST00000619081 385 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 C20orf181-201ENST00000623918 480 ntBASIC20.87■□□□□ 0.93
SRGAP3O43295 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.87■□□□□ 0.93
SRGAP3O43295 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SRGAP3O43295 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.87■□□□□ 0.93
SRGAP3O43295 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.87■□□□□ 0.93
SRGAP3O43295 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRGAP3O43295 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SRGAP3O43295 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SRGAP3O43295 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SRGAP3O43295 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.86■□□□□ 0.93
SRGAP3O43295 UPF3AP3-201ENST00000420996 769 ntBASIC20.86■□□□□ 0.93
SRGAP3O43295 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.86■□□□□ 0.93
SRGAP3O43295 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.86■□□□□ 0.93
SRGAP3O43295 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.86■□□□□ 0.93
SRGAP3O43295 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SRGAP3O43295 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRGAP3O43295 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms