Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.16■□□□□ 0.18
NDUFS4O43181 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS4O43181 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS4O43181 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS4O43181 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS4O43181 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS4O43181 AGGF1P2-201ENST00000426656 2106 ntBASIC16.16■□□□□ 0.18
NDUFS4O43181 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS4O43181 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.16■□□□□ 0.18
NDUFS4O43181 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDUFS4O43181 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NDUFS4O43181 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
NDUFS4O43181 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 AC007967.2-201ENST00000432613 625 ntBASIC16.15■□□□□ 0.18
NDUFS4O43181 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.15■□□□□ 0.18
NDUFS4O43181 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.15■□□□□ 0.18
NDUFS4O43181 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 AC106730.1-201ENST00000566722 1090 ntBASIC16.15■□□□□ 0.18
NDUFS4O43181 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.15■□□□□ 0.18
NDUFS4O43181 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.15■□□□□ 0.18
NDUFS4O43181 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDUFS4O43181 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NDUFS4O43181 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFS4O43181 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.15■□□□□ 0.18
NDUFS4O43181 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
NDUFS4O43181 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
NDUFS4O43181 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NDUFS4O43181 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS4O43181 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDUFS4O43181 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDUFS4O43181 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NDUFS4O43181 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.14■□□□□ 0.17
NDUFS4O43181 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.14■□□□□ 0.17
NDUFS4O43181 CXCL1P1-201ENST00000502804 216 ntBASIC16.14■□□□□ 0.17
NDUFS4O43181 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NDUFS4O43181 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS4O43181 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS4O43181 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS4O43181 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 AC064836.3-201ENST00000607928 673 ntBASIC16.14■□□□□ 0.17
NDUFS4O43181 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS4O43181 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NDUFS4O43181 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS4O43181 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS4O43181 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms