Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBFD1O14562 AL022326.1-202ENST00000641533 845 ntBASIC16.39■□□□□ 0.21
UBFD1O14562 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.39■□□□□ 0.21
UBFD1O14562 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBFD1O14562 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.39■□□□□ 0.21
UBFD1O14562 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBFD1O14562 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBFD1O14562 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 AC022188.1-201ENST00000620960 1664 ntBASIC16.39■□□□□ 0.21
UBFD1O14562 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.39■□□□□ 0.21
UBFD1O14562 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBFD1O14562 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBFD1O14562 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
UBFD1O14562 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBFD1O14562 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.38■□□□□ 0.21
UBFD1O14562 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.38■□□□□ 0.21
UBFD1O14562 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.38■□□□□ 0.21
UBFD1O14562 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.38■□□□□ 0.21
UBFD1O14562 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.38■□□□□ 0.21
UBFD1O14562 FOSL1P1-201ENST00000511041 816 ntBASIC16.38■□□□□ 0.21
UBFD1O14562 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBFD1O14562 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.38■□□□□ 0.21
UBFD1O14562 AL732292.2-201ENST00000609649 430 ntBASIC16.38■□□□□ 0.21
UBFD1O14562 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.38■□□□□ 0.21
UBFD1O14562 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBFD1O14562 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
UBFD1O14562 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.38■□□□□ 0.21
UBFD1O14562 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 TOP3BP1-201ENST00000420768 1380 ntBASIC16.38■□□□□ 0.21
UBFD1O14562 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBFD1O14562 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
UBFD1O14562 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.37■□□□□ 0.21
UBFD1O14562 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.37■□□□□ 0.21
UBFD1O14562 GGT3P-204ENST00000453783 1664 ntBASIC16.37■□□□□ 0.21
UBFD1O14562 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 AL512652.2-201ENST00000625156 1716 ntBASIC16.37■□□□□ 0.21
UBFD1O14562 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.37■□□□□ 0.21
UBFD1O14562 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
UBFD1O14562 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
UBFD1O14562 PAWRP1-201ENST00000451083 565 ntBASIC16.37■□□□□ 0.21
UBFD1O14562 AC091076.1-201ENST00000610741 619 ntBASIC16.37■□□□□ 0.21
UBFD1O14562 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.37■□□□□ 0.21
UBFD1O14562 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBFD1O14562 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.36■□□□□ 0.21
UBFD1O14562 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.36■□□□□ 0.21
UBFD1O14562 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.36■□□□□ 0.21
UBFD1O14562 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 AL365203.3-201ENST00000609742 2057 ntBASIC16.36■□□□□ 0.21
UBFD1O14562 PAUPAR-201ENST00000630360 2965 ntBASIC16.36■□□□□ 0.21
UBFD1O14562 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.36■□□□□ 0.21
UBFD1O14562 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.36■□□□□ 0.21
UBFD1O14562 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms