Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC092053.1-201ENST00000605787 1936 ntBASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CROCCP1-201ENST00000426910 5675 ntBASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL139400.1-201ENST00000366220 510 ntBASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 HLA-J-203ENST00000494367 1087 ntBASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC141586.5-201ENST00000624546 2050 ntBASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PP12613-201ENST00000424958 2230 ntBASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.83■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.83■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SPCS2P4-201ENST00000436160 681 ntBASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 CYMP-203ENST00000474680 1263 ntBASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AP002490.2-201ENST00000524791 560 ntBASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AC069335.1-201ENST00000489972 472 ntBASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AC093520.2-201ENST00000561830 333 ntBASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AC013467.2-201ENST00000605472 835 ntBASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
C1QTNF3-AMACRE9PGA6 AC106028.4-201ENST00000614509 607 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms