Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 CU634019.7-201ENST00000624153 1185 ntBASIC12.88□□□□□ -0.35
COL6A5A8TX70 FP236241.2-201ENST00000624906 1185 ntBASIC12.88□□□□□ -0.35
COL6A5A8TX70 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 AC004461.2-201ENST00000629517 803 ntBASIC12.88□□□□□ -0.35
COL6A5A8TX70 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 LINC00895-201ENST00000629028 1637 ntBASIC12.88□□□□□ -0.35
COL6A5A8TX70 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.88□□□□□ -0.35
COL6A5A8TX70 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL6A5A8TX70 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL6A5A8TX70 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AC104982.3-201ENST00000581995 514 ntBASIC12.87□□□□□ -0.35
COL6A5A8TX70 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AC020765.3-201ENST00000613051 740 ntBASIC12.87□□□□□ -0.35
COL6A5A8TX70 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 AL591846.1-201ENST00000451736 433 ntBASIC12.87□□□□□ -0.35
COL6A5A8TX70 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL6A5A8TX70 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.87□□□□□ -0.35
COL6A5A8TX70 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.86□□□□□ -0.35
COL6A5A8TX70 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL6A5A8TX70 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 SPDYE17-201ENST00000412399 783 ntBASIC12.86□□□□□ -0.35
COL6A5A8TX70 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.86□□□□□ -0.35
COL6A5A8TX70 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms