Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.96■□□□□ 0.46
RCCD1A6NED2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RCCD1A6NED2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 AL353135.1-201ENST00000606729 504 ntBASIC17.95■□□□□ 0.46
RCCD1A6NED2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RCCD1A6NED2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.95■□□□□ 0.46
RCCD1A6NED2 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.94■□□□□ 0.46
RCCD1A6NED2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 ABCD1P5-201ENST00000445663 754 ntBASIC17.94■□□□□ 0.46
RCCD1A6NED2 LINC00265-3P-201ENST00000447588 903 ntBASIC17.94■□□□□ 0.46
RCCD1A6NED2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.94■□□□□ 0.46
RCCD1A6NED2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RCCD1A6NED2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 GGT4P-201ENST00000623672 1708 ntBASIC17.93■□□□□ 0.46
RCCD1A6NED2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 AC074051.2-201ENST00000565115 352 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms