Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 AC104819.1-201ENST00000504587 486 ntBASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 AP000867.3-201ENST00000524675 377 ntBASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 AL353135.1-201ENST00000606729 504 ntBASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV9S1A1TA0A576 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV9S1A1TA0A576 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TCRBV9S1A1TA0A576 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV9S1A1TA0A576 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.02■□□□□ 0.31
TCRBV9S1A1TA0A576 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 AL365203.3-201ENST00000609742 2057 ntBASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 PAUPAR-201ENST00000630360 2965 ntBASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 KRT18P21-201ENST00000515767 1272 ntBASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 MIR5100-201ENST00000579544 119 ntBASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV9S1A1TA0A576 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 AC012615.1-201ENST00000565797 1299 ntBASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 DBP-204ENST00000599385 709 ntTSL 3 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 AC099336.1-202ENST00000602961 463 ntBASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 NPAP1P7-201ENST00000613027 823 ntBASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV9S1A1TA0A576 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms