Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 HLA-J-202ENST00000469281 1241 ntBASIC19.27■□□□□ 0.68
CLIC4Q9Y696 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 PI4KAP1-204ENST00000612579 1703 ntBASIC19.27■□□□□ 0.68
CLIC4Q9Y696 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLIC4Q9Y696 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 CYP2T1P-202ENST00000641596 2535 ntBASIC19.26■□□□□ 0.67
CLIC4Q9Y696 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLIC4Q9Y696 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 RPS2P1-201ENST00000434010 821 ntBASIC19.25■□□□□ 0.67
CLIC4Q9Y696 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 MIR4492-201ENST00000581627 80 ntBASIC19.25■□□□□ 0.67
CLIC4Q9Y696 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 MPDU1-223ENST00000582151 728 ntBASIC19.25■□□□□ 0.67
CLIC4Q9Y696 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 AC107918.4-202ENST00000641623 219 ntBASIC19.25■□□□□ 0.67
CLIC4Q9Y696 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.25■□□□□ 0.67
CLIC4Q9Y696 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 ME2P1-201ENST00000426028 1970 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms