Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 KRT18P34-201ENST00000488218 1270 ntBASIC17.54■□□□□ 0.4
YIPF1Q9Y548 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.54■□□□□ 0.4
YIPF1Q9Y548 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AC142381.1-201ENST00000426099 345 ntBASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AC055876.3-201ENST00000431496 288 ntBASIC17.53■□□□□ 0.4
YIPF1Q9Y548 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AC140878.1-201ENST00000565277 250 ntBASIC17.53■□□□□ 0.4
YIPF1Q9Y548 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 AC138649.4-201ENST00000612222 287 ntBASIC17.53■□□□□ 0.4
YIPF1Q9Y548 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.53■□□□□ 0.4
YIPF1Q9Y548 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC092068.3-201ENST00000587894 2016 ntBASIC17.52■□□□□ 0.4
YIPF1Q9Y548 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC006277.1-201ENST00000624348 1610 ntBASIC17.52■□□□□ 0.4
YIPF1Q9Y548 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 TREML5P-201ENST00000421694 576 ntBASIC17.52■□□□□ 0.4
YIPF1Q9Y548 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC105233.2-201ENST00000523697 349 ntBASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AF228730.5-201ENST00000530288 346 ntBASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC013467.2-201ENST00000605472 835 ntBASIC17.52■□□□□ 0.4
YIPF1Q9Y548 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF1Q9Y548 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms