Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 AC125807.1-201ENST00000483097 614 ntBASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 RNA5SP421-201ENST00000516864 134 ntBASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPO2Q9UMS6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AC055876.3-201ENST00000431496 288 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 MIR3197-201ENST00000582241 73 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AL390955.2-201ENST00000603032 514 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AC138649.4-201ENST00000612222 287 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AC018529.1-201ENST00000613063 361 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AC007967.4-201ENST00000614700 386 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 MIR6080-201ENST00000617359 66 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 BCL2-203ENST00000589955 5011 ntBASIC19.27■□□□□ 0.68
SYNPO2Q9UMS6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SYNPO2Q9UMS6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNPO2Q9UMS6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 AC060834.1-201ENST00000443027 2032 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 BCRP1-201ENST00000444246 691 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 DUX4L27-201ENST00000554796 1261 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 SPTSSB-204ENST00000617024 1292 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 AC006538.1-201ENST00000567905 1585 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 AP3S2-216ENST00000617003 1561 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 AC020763.4-201ENST00000623414 4170 ntBASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPO2Q9UMS6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms