Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 MYCLP2-201ENST00000449268 967 ntBASIC21.22■□□□□ 0.99
CCNL1Q9UK58 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 MIR4525-201ENST00000580000 75 ntBASIC21.22■□□□□ 0.99
CCNL1Q9UK58 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 SRD5A3P1-201ENST00000603021 949 ntBASIC21.22■□□□□ 0.99
CCNL1Q9UK58 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCNL1Q9UK58 AC009113.1-201ENST00000570267 2443 ntBASIC21.21■□□□□ 0.99
CCNL1Q9UK58 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 AC098818.2-201ENST00000564925 2320 ntBASIC21.21■□□□□ 0.99
CCNL1Q9UK58 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 REXO1L6P-201ENST00000603433 1515 ntBASIC21.21■□□□□ 0.99
CCNL1Q9UK58 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 CTBP2P3-201ENST00000585629 1255 ntBASIC21.21■□□□□ 0.99
CCNL1Q9UK58 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNL1Q9UK58 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.2■□□□□ 0.99
CCNL1Q9UK58 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.2■□□□□ 0.99
CCNL1Q9UK58 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AC234783.1-201ENST00000441761 496 ntBASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 ELK1P1-201ENST00000485699 580 ntBASIC21.2■□□□□ 0.98
CCNL1Q9UK58 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 TPRX2P-201ENST00000535362 881 ntBASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.2■□□□□ 0.98
CCNL1Q9UK58 COX11-210ENST00000639671 696 ntBASIC21.2■□□□□ 0.98
CCNL1Q9UK58 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 TNXA-203ENST00000507684 2038 ntBASIC21.2■□□□□ 0.98
CCNL1Q9UK58 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms