Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EBF1Q9UH73 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.22■□□□□ 0.35
EBF1Q9UH73 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 CNN2P2-201ENST00000443536 909 ntBASIC17.21■□□□□ 0.35
EBF1Q9UH73 CNN2P3-201ENST00000450201 906 ntBASIC17.21■□□□□ 0.35
EBF1Q9UH73 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 AL136317.3-201ENST00000618497 906 ntBASIC17.21■□□□□ 0.35
EBF1Q9UH73 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EBF1Q9UH73 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBF1Q9UH73 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBF1Q9UH73 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.21■□□□□ 0.34
EBF1Q9UH73 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBF1Q9UH73 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBF1Q9UH73 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBF1Q9UH73 CICP6-201ENST00000457191 2729 ntBASIC17.2■□□□□ 0.34
EBF1Q9UH73 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 PMS2P4-201ENST00000412466 1052 ntBASIC17.2■□□□□ 0.34
EBF1Q9UH73 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 AL592309.1-201ENST00000443127 649 ntBASIC17.2■□□□□ 0.34
EBF1Q9UH73 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 DUX4L27-201ENST00000554796 1261 ntBASIC17.2■□□□□ 0.34
EBF1Q9UH73 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBF1Q9UH73 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
EBF1Q9UH73 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EBF1Q9UH73 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EBF1Q9UH73 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBF1Q9UH73 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBF1Q9UH73 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBF1Q9UH73 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBF1Q9UH73 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.19■□□□□ 0.34
EBF1Q9UH73 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms