Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 AL671277.1-201ENST00000429656 993 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 RN7SL589P-201ENST00000481268 310 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 RARRES2P8-201ENST00000566335 367 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 MIR4492-201ENST00000581627 80 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 AL031055.1-201ENST00000606362 631 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 AC026120.1-201ENST00000611536 926 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 AL161645.1-201ENST00000622716 1255 ntBASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TUBB8P12-201ENST00000308911 1335 ntBASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TUBB7P-202ENST00000428444 1305 ntBASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TUBB8P7-204ENST00000567960 1332 ntBASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TIMM8BP1-201ENST00000452384 211 ntBASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 AC092053.1-201ENST00000605787 1936 ntBASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCF1Q9UBD9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 AKAP8P1-201ENST00000434743 1349 ntBASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 AL023806.1-201ENST00000603994 1649 ntBASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 TFAMP1-201ENST00000412727 736 ntBASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 KRT8P48-201ENST00000515599 1220 ntBASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 AL135744.1-201ENST00000565098 629 ntBASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 CYP2A7P1-201ENST00000595391 815 ntBASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCF1Q9UBD9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms