Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 SLC25A6P4-201ENST00000586535 553 ntBASIC17.12■□□□□ 0.33
HACD3Q9P035 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HACD3Q9P035 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.12■□□□□ 0.33
HACD3Q9P035 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HACD3Q9P035 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HACD3Q9P035 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.11■□□□□ 0.33
HACD3Q9P035 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HACD3Q9P035 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HACD3Q9P035 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HACD3Q9P035 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.11■□□□□ 0.33
HACD3Q9P035 MRPL3P1-201ENST00000400109 1033 ntBASIC17.11■□□□□ 0.33
HACD3Q9P035 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.11■□□□□ 0.33
HACD3Q9P035 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.11■□□□□ 0.33
HACD3Q9P035 AP002490.2-201ENST00000524791 560 ntBASIC17.11■□□□□ 0.33
HACD3Q9P035 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.11■□□□□ 0.33
HACD3Q9P035 AC012640.2-201ENST00000561606 901 ntBASIC17.11■□□□□ 0.33
HACD3Q9P035 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
HACD3Q9P035 AC008667.4-201ENST00000607370 168 ntBASIC17.11■□□□□ 0.33
HACD3Q9P035 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HACD3Q9P035 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
HACD3Q9P035 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HACD3Q9P035 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HACD3Q9P035 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HACD3Q9P035 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.1■□□□□ 0.33
HACD3Q9P035 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HACD3Q9P035 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.1■□□□□ 0.33
HACD3Q9P035 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HACD3Q9P035 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
HACD3Q9P035 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.1■□□□□ 0.33
HACD3Q9P035 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.1■□□□□ 0.33
HACD3Q9P035 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.1■□□□□ 0.33
HACD3Q9P035 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.1■□□□□ 0.33
HACD3Q9P035 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms