Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 NEFHP1-201ENST00000412845 2629 ntBASIC19.21■□□□□ 0.66
HOXC10Q9NYD6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 AC004890.2-204ENST00000481968 304 ntBASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 AC063926.2-201ENST00000623766 1308 ntBASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC10Q9NYD6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 PRYP6-201ENST00000514804 343 ntBASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 AC013467.2-201ENST00000605472 835 ntBASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HOXC10Q9NYD6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AC006277.1-201ENST00000624348 1610 ntBASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AC100757.3-201ENST00000622361 1406 ntBASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 CROCCP2-202ENST00000412962 2773 ntBASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC10Q9NYD6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms