Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 HCG4-201ENST00000418983 998 ntBASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 AC096734.2-201ENST00000562054 433 ntBASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 AC120114.3-201ENST00000611923 658 ntBASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 ALOX12P2-203ENST00000570921 1945 ntBASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 HMGA1P7-201ENST00000406908 502 ntBASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 MIR4515-201ENST00000584082 81 ntBASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 PCDHB19P-201ENST00000570871 2371 ntBASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
BLOC1S4Q9NUP1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 GGT4P-201ENST00000623672 1708 ntBASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AC012569.1-201ENST00000591191 1524 ntBASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AL031731.1-201ENST00000642131 2094 ntBASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AC007967.2-201ENST00000432613 625 ntBASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AC106730.1-201ENST00000566722 1090 ntBASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AC064836.3-201ENST00000607928 673 ntBASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.71■□□□□ 0.59
BLOC1S4Q9NUP1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.71■□□□□ 0.58
BLOC1S4Q9NUP1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
BLOC1S4Q9NUP1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms