Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 KRT17P2-201ENST00000300992 1314 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SLC25A1P3-201ENST00000395415 828 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ECEL1P3-201ENST00000427961 737 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 KRT18P48-201ENST00000434763 852 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ECEL1P2-202ENST00000465689 757 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AL355075.4-201ENST00000554988 638 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 AL365203.3-201ENST00000609742 2057 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CYP2D8P-201ENST00000433633 1490 ntBASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SND1-IT1Q9HBX3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 AC008550.1-201ENST00000511500 884 ntBASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 GCSHP2-201ENST00000560971 527 ntBASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 AL136038.4-201ENST00000603606 1261 ntBASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms