Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 AC004817.3-201ENST00000602957 2129 ntBASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.34■□□□□ 0.21
LIN28AQ9H9Z2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN28AQ9H9Z2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.33■□□□□ 0.21
LIN28AQ9H9Z2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN28AQ9H9Z2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN28AQ9H9Z2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN28AQ9H9Z2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN28AQ9H9Z2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 MRPL3P1-201ENST00000400109 1033 ntBASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AP002469.2-201ENST00000531724 424 ntBASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AL355877.3-201ENST00000622820 899 ntBASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 KRT8P10-201ENST00000450021 1447 ntBASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 AC133963.1-201ENST00000504166 1679 ntBASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN28AQ9H9Z2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 FAM197Y8-203ENST00000450145 560 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 FGFR3P6-201ENST00000457012 610 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AC122714.2-201ENST00000502787 707 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AC106795.1-205ENST00000512851 1056 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 AC109462.3-201ENST00000573934 613 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms