Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
MMP28Q9H239 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.98□□□□□ -0.01
MMP28Q9H239 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
MMP28Q9H239 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.98□□□□□ -0.01
MMP28Q9H239 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.98□□□□□ -0.01
MMP28Q9H239 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP28Q9H239 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MMP28Q9H239 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP28Q9H239 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP28Q9H239 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP28Q9H239 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP28Q9H239 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP28Q9H239 AC073347.1-201ENST00000421633 2643 ntBASIC14.97□□□□□ -0.01
MMP28Q9H239 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.97□□□□□ -0.01
MMP28Q9H239 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.97□□□□□ -0.01
MMP28Q9H239 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MMP28Q9H239 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.97□□□□□ -0.01
MMP28Q9H239 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.97□□□□□ -0.01
MMP28Q9H239 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP28Q9H239 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP28Q9H239 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 AC139887.4-201ENST00000607877 719 ntBASIC14.97□□□□□ -0.01
MMP28Q9H239 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP28Q9H239 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP28Q9H239 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
MMP28Q9H239 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP28Q9H239 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MMP28Q9H239 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MMP28Q9H239 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.96□□□□□ -0.01
MMP28Q9H239 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MMP28Q9H239 AL009178.2-201ENST00000597278 2719 ntBASIC14.96□□□□□ -0.01
MMP28Q9H239 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MMP28Q9H239 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MMP28Q9H239 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
MMP28Q9H239 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP28Q9H239 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms