Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 REXO1L11P-201ENST00000620964 1927 ntBASIC13.73□□□□□ -0.21
NKX6-2Q9C056 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 AC133681.1-201ENST00000465482 601 ntBASIC13.73□□□□□ -0.21
NKX6-2Q9C056 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.73□□□□□ -0.21
NKX6-2Q9C056 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 AC110285.5-201ENST00000611501 352 ntBASIC13.73□□□□□ -0.21
NKX6-2Q9C056 AL023875.1-201ENST00000640777 796 ntBASIC13.73□□□□□ -0.21
NKX6-2Q9C056 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 CICP24-201ENST00000605464 2705 ntBASIC13.73□□□□□ -0.21
NKX6-2Q9C056 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-2Q9C056 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AC069152.1-201ENST00000438030 544 ntBASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AP000692.2-201ENST00000608391 879 ntBASIC13.72□□□□□ -0.21
NKX6-2Q9C056 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AC005840.4-201ENST00000541242 2494 ntBASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 FSCN1P1-201ENST00000568912 1481 ntBASIC13.72□□□□□ -0.21
NKX6-2Q9C056 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AL024508.2-201ENST00000607749 1894 ntBASIC13.72□□□□□ -0.21
NKX6-2Q9C056 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-2Q9C056 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-2Q9C056 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NKX6-2Q9C056 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NKX6-2Q9C056 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-2Q9C056 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms