Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 AC132008.2-207ENST00000454517 770 ntBASIC16.9■□□□□ 0.3
CPNE1Q99829 BX005266.1-201ENST00000473402 457 ntBASIC16.9■□□□□ 0.3
CPNE1Q99829 AC106795.1-205ENST00000512851 1056 ntBASIC16.9■□□□□ 0.3
CPNE1Q99829 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE1Q99829 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE1Q99829 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE1Q99829 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE1Q99829 AL022326.1-202ENST00000641533 845 ntBASIC16.9■□□□□ 0.3
CPNE1Q99829 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CPNE1Q99829 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPNE1Q99829 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE1Q99829 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE1Q99829 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE1Q99829 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.89■□□□□ 0.3
CPNE1Q99829 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.89■□□□□ 0.3
CPNE1Q99829 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE1Q99829 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.89■□□□□ 0.3
CPNE1Q99829 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CPNE1Q99829 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CPNE1Q99829 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE1Q99829 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE1Q99829 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE1Q99829 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE1Q99829 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.89■□□□□ 0.29
CPNE1Q99829 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPNE1Q99829 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 AC138894.3-201ENST00000603787 634 ntBASIC16.89■□□□□ 0.29
CPNE1Q99829 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.89■□□□□ 0.29
CPNE1Q99829 AC091076.1-201ENST00000610741 619 ntBASIC16.89■□□□□ 0.29
CPNE1Q99829 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CPNE1Q99829 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPNE1Q99829 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 MTHFR-217ENST00000641820 1569 ntBASIC16.89■□□□□ 0.29
CPNE1Q99829 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE1Q99829 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE1Q99829 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE1Q99829 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE1Q99829 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
CPNE1Q99829 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CPNE1Q99829 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE1Q99829 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE1Q99829 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE1Q99829 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.88■□□□□ 0.29
CPNE1Q99829 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE1Q99829 AC064862.7-201ENST00000604520 867 ntBASIC16.88■□□□□ 0.29
CPNE1Q99829 AL139288.1-201ENST00000623748 933 ntBASIC16.88■□□□□ 0.29
CPNE1Q99829 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE1Q99829 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE1Q99829 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE1Q99829 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms