Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS2Q99743 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS2Q99743 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPAS2Q99743 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 AL513523.2-202ENST00000427283 2040 ntBASIC16.59■□□□□ 0.25
NPAS2Q99743 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPAS2Q99743 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.59■□□□□ 0.25
NPAS2Q99743 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS2Q99743 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 AF238378.1-201ENST00000526806 358 ntBASIC16.59■□□□□ 0.25
NPAS2Q99743 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS2Q99743 LINC01711-201ENST00000598340 967 ntBASIC16.59■□□□□ 0.25
NPAS2Q99743 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS2Q99743 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 PAUPAR-201ENST00000630360 2965 ntBASIC16.59■□□□□ 0.25
NPAS2Q99743 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NPAS2Q99743 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NPAS2Q99743 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS2Q99743 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS2Q99743 AL160237.2-201ENST00000556165 472 ntBASIC16.58■□□□□ 0.24
NPAS2Q99743 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 AC125634.1-201ENST00000438758 1403 ntBASIC16.58■□□□□ 0.24
NPAS2Q99743 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 TP73-AS1-210ENST00000637775 1455 ntBASIC16.58■□□□□ 0.24
NPAS2Q99743 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS2Q99743 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS2Q99743 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS2Q99743 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NPAS2Q99743 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS2Q99743 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPAS2Q99743 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS2Q99743 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS2Q99743 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS2Q99743 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms