Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AL589739.1-201ENST00000607720 493 ntBASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 AC017083.2-201ENST00000608069 979 ntBASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 BTBD7P1-201ENST00000447253 1453 ntBASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 AC022494.1-201ENST00000466044 728 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 AC011495.1-201ENST00000498085 584 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 AL844908.2-201ENST00000609461 460 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 MIR6799-201ENST00000620297 69 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 AL021920.2-201ENST00000624828 1351 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 LINC00895-201ENST00000629028 1637 ntBASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN4Q96NY8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 PCDHB18P-201ENST00000524813 2368 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 FAM220BP-201ENST00000377689 816 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms