Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITCHQ96J02 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITCHQ96J02 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
ITCHQ96J02 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.14■□□□□ 0.18
ITCHQ96J02 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.18
ITCHQ96J02 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.14■□□□□ 0.18
ITCHQ96J02 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 AL513523.2-202ENST00000427283 2040 ntBASIC16.14■□□□□ 0.17
ITCHQ96J02 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
ITCHQ96J02 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ITCHQ96J02 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.14■□□□□ 0.17
ITCHQ96J02 TSSC2-201ENST00000450217 709 ntBASIC16.14■□□□□ 0.17
ITCHQ96J02 KRT17P6-201ENST00000453795 1220 ntBASIC16.14■□□□□ 0.17
ITCHQ96J02 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 BNIP3P18-201ENST00000593976 575 ntBASIC16.14■□□□□ 0.17
ITCHQ96J02 AC148477.5-201ENST00000625164 1645 ntBASIC16.14■□□□□ 0.17
ITCHQ96J02 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.14■□□□□ 0.17
ITCHQ96J02 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ITCHQ96J02 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ITCHQ96J02 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.14■□□□□ 0.17
ITCHQ96J02 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ITCHQ96J02 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ITCHQ96J02 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ITCHQ96J02 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.14■□□□□ 0.17
ITCHQ96J02 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.13■□□□□ 0.17
ITCHQ96J02 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.13■□□□□ 0.17
ITCHQ96J02 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
ITCHQ96J02 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.13■□□□□ 0.17
ITCHQ96J02 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ITCHQ96J02 RCN1P2-201ENST00000398357 915 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 SPDYE21P-201ENST00000413323 827 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ITCHQ96J02 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.13■□□□□ 0.17
ITCHQ96J02 DRAXINP1-201ENST00000437611 948 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 DUX4L17-201ENST00000557360 1267 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ITCHQ96J02 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ITCHQ96J02 AP000867.4-201ENST00000641616 219 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 NSUN5P1-202ENST00000421140 1535 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 NSUN5P2-203ENST00000457352 1529 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ITCHQ96J02 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.13■□□□□ 0.17
ITCHQ96J02 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 AC097637.2-201ENST00000624096 1997 ntBASIC16.13■□□□□ 0.17
ITCHQ96J02 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ITCHQ96J02 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms