Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 AL160237.2-201ENST00000556165 472 ntBASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 AL031008.1-201ENST00000619963 541 ntBASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 GGT3P-204ENST00000453783 1664 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CYP2T1P-202ENST00000641596 2535 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 MRPL20P1-201ENST00000400819 433 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AP002469.2-201ENST00000531724 424 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AC087641.1-201ENST00000557561 1021 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 OR7E47P-204ENST00000575924 449 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AP001350.2-201ENST00000625104 1094 ntBASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM5Q96HC4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDLIM5Q96HC4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDLIM5Q96HC4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.46■□□□□ 0.22
PDLIM5Q96HC4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDLIM5Q96HC4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDLIM5Q96HC4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms