Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 FAM86MP-201ENST00000340703 885 ntBASIC19.52■□□□□ 0.72
CDCA5Q96FF9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 SNX29P1-201ENST00000548357 1007 ntBASIC19.52■□□□□ 0.72
CDCA5Q96FF9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.52■□□□□ 0.72
CDCA5Q96FF9 COX11-210ENST00000639671 696 ntBASIC19.52■□□□□ 0.72
CDCA5Q96FF9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA5Q96FF9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.52■□□□□ 0.71
CDCA5Q96FF9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CDCA5Q96FF9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA5Q96FF9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 AC234783.1-201ENST00000441761 496 ntBASIC19.51■□□□□ 0.71
CDCA5Q96FF9 KRT223P-202ENST00000449164 1292 ntBASIC19.51■□□□□ 0.71
CDCA5Q96FF9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 TPRX2P-201ENST00000535362 881 ntBASIC19.51■□□□□ 0.71
CDCA5Q96FF9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 AC099568.2-201ENST00000609194 695 ntBASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA5Q96FF9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 SERBP1P3-201ENST00000459980 809 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AC123567.1-201ENST00000548294 1261 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AC023310.3-201ENST00000557027 670 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AC100756.1-201ENST00000562736 682 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AP005482.1-201ENST00000563722 1273 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AC138749.3-201ENST00000567691 622 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 AC116165.1-201ENST00000611806 668 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 MIR6775-201ENST00000617557 69 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 ABALON-201ENST00000629058 1903 ntBASIC19.5■□□□□ 0.71
CDCA5Q96FF9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA5Q96FF9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms