Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.33■□□□□ 0.2
RNF31Q96EP0 PDPK2P-202ENST00000562415 1191 ntBASIC16.33■□□□□ 0.2
RNF31Q96EP0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 AL139327.4-201ENST00000612362 153 ntBASIC16.33■□□□□ 0.2
RNF31Q96EP0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 C20orf181-201ENST00000623918 480 ntBASIC16.33■□□□□ 0.2
RNF31Q96EP0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 AC006116.8-202ENST00000587620 1550 ntBASIC16.33■□□□□ 0.2
RNF31Q96EP0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF31Q96EP0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 FER1L4-210ENST00000615531 5998 ntBASIC16.32■□□□□ 0.2
RNF31Q96EP0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 MYCLP1-201ENST00000372451 1075 ntBASIC16.32■□□□□ 0.2
RNF31Q96EP0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 CNN2P11-201ENST00000429351 262 ntBASIC16.32■□□□□ 0.2
RNF31Q96EP0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 AC091812.2-201ENST00000619081 385 ntBASIC16.32■□□□□ 0.2
RNF31Q96EP0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF31Q96EP0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF31Q96EP0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.31■□□□□ 0.2
RNF31Q96EP0 AL513480.1-201ENST00000451731 511 ntBASIC16.31■□□□□ 0.2
RNF31Q96EP0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 AC096734.2-201ENST00000562054 433 ntBASIC16.31■□□□□ 0.2
RNF31Q96EP0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF31Q96EP0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF31Q96EP0 ELL2P1-201ENST00000413990 1906 ntBASIC16.31■□□□□ 0.2
RNF31Q96EP0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms