Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 PI4KAP1-204ENST00000612579 1703 ntBASIC17.41■□□□□ 0.38
HDAC11Q96DB2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
HDAC11Q96DB2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 RPS2P28-201ENST00000314255 741 ntBASIC17.4■□□□□ 0.38
HDAC11Q96DB2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 AL160237.2-201ENST00000556165 472 ntBASIC17.4■□□□□ 0.38
HDAC11Q96DB2 AC105339.3-201ENST00000560043 636 ntBASIC17.4■□□□□ 0.38
HDAC11Q96DB2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 AC148477.8-201ENST00000624298 468 ntBASIC17.4■□□□□ 0.38
HDAC11Q96DB2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.4■□□□□ 0.38
HDAC11Q96DB2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDAC11Q96DB2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
HDAC11Q96DB2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.39■□□□□ 0.38
HDAC11Q96DB2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 AC012640.2-201ENST00000561606 901 ntBASIC17.39■□□□□ 0.37
HDAC11Q96DB2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 MIR1199-201ENST00000621445 119 ntBASIC17.39■□□□□ 0.37
HDAC11Q96DB2 FAM215A-202ENST00000632077 792 ntBASIC17.39■□□□□ 0.37
HDAC11Q96DB2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 AL645728.1-201ENST00000366221 2101 ntBASIC17.39■□□□□ 0.37
HDAC11Q96DB2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 AC002310.6-201ENST00000624451 1377 ntBASIC17.39■□□□□ 0.37
HDAC11Q96DB2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC11Q96DB2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 FLJ38576-201ENST00000623820 2459 ntBASIC17.38■□□□□ 0.37
HDAC11Q96DB2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC11Q96DB2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms