Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 MIR3687-2-201ENST00000577708 61 ntBASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 MIR3687-1-201ENST00000614492 61 ntBASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC010654.1-201ENST00000615722 808 ntBASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC004790.2-201ENST00000623588 572 ntBASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.77■□□□□ 0.28
SH3KBP1Q96B97 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH3KBP1Q96B97 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AD000864.1-201ENST00000624076 2295 ntBASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AC004832.2-201ENST00000426397 482 ntBASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AC139530.3-201ENST00000620344 690 ntBASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH3KBP1Q96B97 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms