Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 AL512343.1-201ENST00000605837 169 ntBASIC16.67■□□□□ 0.26
CLDN23Q96B33 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN23Q96B33 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN23Q96B33 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN23Q96B33 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN23Q96B33 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN23Q96B33 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN23Q96B33 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN23Q96B33 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 SERBP1P3-201ENST00000459980 809 ntBASIC16.66■□□□□ 0.26
CLDN23Q96B33 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.66■□□□□ 0.26
CLDN23Q96B33 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN23Q96B33 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN23Q96B33 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN23Q96B33 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AC108860.2-201ENST00000562760 2183 ntBASIC16.65■□□□□ 0.26
CLDN23Q96B33 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AC245100.3-201ENST00000441281 285 ntBASIC16.65■□□□□ 0.26
CLDN23Q96B33 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 MIR4259-201ENST00000584466 101 ntBASIC16.65■□□□□ 0.26
CLDN23Q96B33 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.65■□□□□ 0.26
CLDN23Q96B33 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN23Q96B33 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN23Q96B33 AC012317.2-201ENST00000623305 2251 ntBASIC16.65■□□□□ 0.26
CLDN23Q96B33 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLDN23Q96B33 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 MYCLP2-201ENST00000449268 967 ntBASIC16.64■□□□□ 0.25
CLDN23Q96B33 AC119751.2-201ENST00000504529 210 ntBASIC16.64■□□□□ 0.25
CLDN23Q96B33 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 AP005482.1-201ENST00000563722 1273 ntBASIC16.64■□□□□ 0.25
CLDN23Q96B33 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 AL033527.4-201ENST00000641026 673 ntBASIC16.64■□□□□ 0.25
CLDN23Q96B33 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms