Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 AL845331.1-201ENST00000424978 1190 ntBASIC15.71■□□□□ 0.11
HTRA1Q92743 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTRA1Q92743 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HTRA1Q92743 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.71■□□□□ 0.11
HTRA1Q92743 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.71■□□□□ 0.11
HTRA1Q92743 KRT8P26-201ENST00000534154 1276 ntBASIC15.71■□□□□ 0.11
HTRA1Q92743 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HTRA1Q92743 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.71■□□□□ 0.11
HTRA1Q92743 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.71■□□□□ 0.11
HTRA1Q92743 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.71■□□□□ 0.11
HTRA1Q92743 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.71■□□□□ 0.11
HTRA1Q92743 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTRA1Q92743 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.71■□□□□ 0.11
HTRA1Q92743 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HTRA1Q92743 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.71■□□□□ 0.11
HTRA1Q92743 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.71■□□□□ 0.1
HTRA1Q92743 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
HTRA1Q92743 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.71■□□□□ 0.1
HTRA1Q92743 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.71■□□□□ 0.1
HTRA1Q92743 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HTRA1Q92743 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HTRA1Q92743 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC133963.1-201ENST00000504166 1679 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC060834.1-201ENST00000443027 2032 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 LYSMD4-203ENST00000378904 2122 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HTRA1Q92743 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.7■□□□□ 0.1
HTRA1Q92743 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 LINC00265-3P-201ENST00000447588 903 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.7■□□□□ 0.1
HTRA1Q92743 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.7■□□□□ 0.1
HTRA1Q92743 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.7■□□□□ 0.1
HTRA1Q92743 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 IGHV3-41-201ENST00000613121 348 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 AL691432.3-201ENST00000621860 400 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.7■□□□□ 0.1
HTRA1Q92743 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC024909.3-201ENST00000611513 2257 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HTRA1Q92743 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HTRA1Q92743 REXO1L11P-201ENST00000620964 1927 ntBASIC15.7■□□□□ 0.1
HTRA1Q92743 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HTRA1Q92743 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HTRA1Q92743 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTRA1Q92743 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.69■□□□□ 0.1
HTRA1Q92743 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.69■□□□□ 0.1
HTRA1Q92743 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.69■□□□□ 0.1
HTRA1Q92743 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
HTRA1Q92743 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.69■□□□□ 0.1
HTRA1Q92743 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.69■□□□□ 0.1
HTRA1Q92743 AP000867.3-201ENST00000524675 377 ntBASIC15.69■□□□□ 0.1
HTRA1Q92743 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.69■□□□□ 0.1
HTRA1Q92743 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.69■□□□□ 0.1
HTRA1Q92743 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms