Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 TERC-201ENST00000602385 541 ntBASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 AC243591.1-201ENST00000452967 1364 ntBASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC44A1Q8WWI5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 AC024909.3-201ENST00000611513 2257 ntBASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 AP002383.4-201ENST00000442518 975 ntBASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 TSSC2-201ENST00000450217 709 ntBASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 AL590787.1-201ENST00000568856 1315 ntBASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC44A1Q8WWI5 GGT3P-204ENST00000453783 1664 ntBASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 TOB2P1-201ENST00000469761 992 ntBASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 PAUPAR-201ENST00000630360 2965 ntBASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC44A1Q8WWI5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC44A1Q8WWI5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms