Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 GPX1P2-201ENST00000429271 606 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC112482.1-201ENST00000492080 688 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC005593.1-201ENST00000624894 515 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 SNX33P1-201ENST00000592116 1762 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC079328.2-201ENST00000561241 3354 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 DNAJB3-201ENST00000446806 729 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC239800.4-201ENST00000603712 296 ntBASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.17■□□□□ 0.34
SHROOM3Q8TF72 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 RHOQP3-201ENST00000437982 621 ntBASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 KRT18P2-201ENST00000447938 1258 ntBASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 AC068137.2-201ENST00000605408 478 ntBASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 AC124067.4-201ENST00000519691 2379 ntBASIC17.16■□□□□ 0.34
SHROOM3Q8TF72 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 AC244107.1-201ENST00000442033 332 ntBASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 HLA-J-202ENST00000469281 1241 ntBASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SHROOM3Q8TF72 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms