Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AL627223.1-201ENST00000416693 442 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AC004967.1-201ENST00000453589 447 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AC023141.5-201ENST00000458585 616 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AC243562.1-201ENST00000560672 389 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AC009093.7-201ENST00000623853 1223 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AC002056.1-201ENST00000395613 760 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD5Q8TDI0 MPDU1-223ENST00000582151 728 ntBASIC16.95■□□□□ 0.3
CHD5Q8TDI0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 AC016027.1-202ENST00000607927 1699 ntBASIC16.94■□□□□ 0.3
CHD5Q8TDI0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 PCGF3-213ENST00000620529 1899 ntBASIC16.94■□□□□ 0.3
CHD5Q8TDI0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 AC073389.1-201ENST00000595595 795 ntBASIC16.94■□□□□ 0.3
CHD5Q8TDI0 AP001350.2-201ENST00000625104 1094 ntBASIC16.94■□□□□ 0.3
CHD5Q8TDI0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 AD000864.1-201ENST00000624076 2295 ntBASIC16.94■□□□□ 0.3
CHD5Q8TDI0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD5Q8TDI0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AC006538.1-201ENST00000567905 1585 ntBASIC16.93■□□□□ 0.3
CHD5Q8TDI0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AL513210.1-201ENST00000629608 234 ntBASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AC084121.4-201ENST00000641598 221 ntBASIC16.93■□□□□ 0.3
CHD5Q8TDI0 AF228730.8-201ENST00000642140 221 ntBASIC16.93■□□□□ 0.3
CHD5Q8TDI0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.93■□□□□ 0.3
CHD5Q8TDI0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms